Search results for "organic compound"

showing 10 items of 431 documents

The Greenland shark Somniosus microcephalus—Hemoglobins and ligand-binding properties

2017

A large amount of data is currently available on the adaptive mechanisms of polar bony fish hemoglobins, but structural information on those of cartilaginous species is scarce. This study presents the first characterisation of the hemoglobin system of one of the longest-living vertebrate species (392 +/- 120 years), the Arctic shark Somniosus microcephalus. Three major hemoglobins are found in its red blood cells and are made of two copies of the same a globin combined with two copies of three very similar beta subunits. The three hemoglobins show very similar oxygenation and carbonylation properties, which are unaffected by urea, a very important compound in marine elasmobranch physiology.…

---0301 basic medicinegenetic structuresProtein ConformationGreenlandlcsh:MedicineRESONANCE RAMAN-SPECTRAHETERODONTUS-PORTUSJACKSONISpectrum Analysis RamanBiochemistrychemistry.chemical_compoundHemoglobinsProtein structureAMINO-ACID SEQUENCEAnimal CellsSequence Analysis ProteinRed Blood CellsUreaNOTOTHENIOID FISHESPost-Translational Modificationlcsh:ScienceHemeChondrichthyesMultidisciplinarybiologyChemistryOrganic CompoundsChemical ReactionsVertebrateEukaryotaMOLECULAR ADAPTATIONSMicrocephalusGlobinsChemistryBiochemistryOptical EquipmentVertebratesPhysical SciencesEngineering and TechnologyCellular TypesResearch ArticleEnvironmental MonitoringProtein BindingQUATERNARY STRUCTURESAllosteric regulationEquipmentSTRETCHING FREQUENCIESHeme03 medical and health sciencesOXYGEN-BINDINGbiology.animalAnimals14. Life underwaterGlobinHemoglobinPhotolysisBlood Cells030102 biochemistry & molecular biologyLaserslcsh:ROrganic ChemistryOrganismsChemical CompoundsBiology and Life SciencesProteinsxxxCell Biologybiology.organism_classificationCARTILAGINOUS FISHOxygen030104 developmental biologySomniosusFishSharkslcsh:QHemoglobinProtein MultimerizationELASMOBRANCH HEMOGLOBINElasmobranchiiPLoS ONE
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Steroid Biomarkers Revisited - Improved Source Identification of Faecal Remains in Archaeological Soil Material.

2017

Steroids are used as faecal markers in environmental and in archaeological studies, because they provide insights into ancient agricultural practices and the former presence of animals. Up to now, steroid analyses could only identify and distinguish between herbivore, pig, and human faecal matter and their residues in soils and sediments. We hypothesized that a finer differentiation between faeces of different livestock animals could be achieved when the analyses of several steroids is combined (Δ5-sterols, 5α-stanols, 5β-stanols, epi-5β-stanols, stanones, and bile acids). We therefore reviewed the existing literature on various faecal steroids from livestock and humans and analysed faeces …

010504 meteorology & atmospheric sciencesPhysiologySwineSocial Scienceslcsh:MedicinePlant ScienceBreeding01 natural sciencesFecesSoilchemistry.chemical_compoundChenodeoxycholic acidMedicine and Health SciencesBilelcsh:ScienceMammalsMultidisciplinaryEcologyOrganic CompoundsGoatsAgricultureRuminantsBreedBody FluidsTrophic InteractionsCoprostanolChemistrySterolsArchaeologyCommunity EcologyPhysical SciencesVertebratesSteroidsLivestockDonkeyAnatomyResearch Article010506 paleontologyLivestockEquinesBiologyGas Chromatography-Mass SpectrometryBile Acids and SaltsGoosePlant-Animal Interactionsbiology.animalAnimalsHumansHerbivoryHorsesFeces0105 earth and related environmental sciencesHerbivorebusiness.industryPlant EcologyOrganic ChemistryEcology and Environmental Scienceslcsh:RChemical CompoundsOrganismsBiology and Life SciencesArchaeologychemistryAmnioteslcsh:QbusinessBiomarkersPLoS ONE
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Volatile Profiles of Emissions from Different Activities Analyzed Using Canister Samplers and Gas Chromatography-Mass Spectrometry (GC/MS) Analysis: …

2017

The objective of present study was to identify volatile organic compounds (VOCs) emitted from several sources (fuels, traffic, landfills, coffee roasting, a street-food laboratory, building work, indoor use of incense and candles, a dental laboratory, etc.) located in Palermo (Italy) by using canister autosamplers and gas chromatography-mass spectrometry (GC-MS) technique. In this study, 181 VOCs were monitored. In the atmosphere of Palermo city, propane, butane, isopentane, methyl pentane, hexane, benzene, toluene, meta- and para-xylene, 1,2,4 trimethyl benzene, 1,3,5 trimethyl benzene, ethylbenzene, 4 ethyl toluene and heptane were identified and quantified in all sampling sites.

010504 meteorology & atmospheric sciencescanisterHealth Toxicology and Mutagenesislcsh:Medicine010501 environmental sciences01 natural sciencesEthylbenzenePalermoArticleGas Chromatography-Mass Spectrometrychemistry.chemical_compoundPropaneCitiesBenzeneindoor0105 earth and related environmental sciencesvolatile organic compounds (VOCs)Air PollutantsVolatile Organic Compoundscanister; indoor; volatile organic compounds (VOCs); PalermoAtmospherelcsh:RPublic Health Environmental and Occupational HealthButaneToluenePentaneIsopentanechemistryItalyEnvironmental chemistryEnvironmental scienceGas chromatography–mass spectrometryEnvironmental MonitoringInternational Journal of Environmental Research and Public Health
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The responses of shoot-root-rhizosphere continuum to simultaneous fertilizer addition, warming, ozone and herbivory in young Scots pine seedlings in …

2017

Abstract It is not clear how climate change in combination with increasing soil nitrogen availability and herbivory affects boreal forests, the largest terrestrial biome in the world. In this study, Scots pine ( Pinus sylvestris ) seedlings were exposed to moderate warming (ca. 1 °C), 1.5 × ambient ozone (O 3 ) concentration, fertilizer addition (120 kg N ha −1 yr −1 ) and shoot herbivory by pine sawfly ( Acantholyda posticalis ) alone and in combination. We measured fine root morphology, mycorrhizal colonization level, root fungal biomass (ergosterol), rhizosphere emission of biogenic volatile organic compounds (BVOCs), and microbial biomass (PLFAs) in the rhizosphere soil as well as seedl…

0106 biological sciences010504 meteorology & atmospheric sciencesField experimentSoil Sciencebiogenic volatile organic compounds (BVOCs)engineering.material01 natural sciencesMicrobiologyectomycorrhizasoil microbesmikrobitorgaaniset yhdisteet0105 earth and related environmental sciencesAbiotic componentmaaperäRhizospherebiologyScots pinegrowth allocationilmastonmuutokset15. Life on landbiology.organism_classificationEctomycorrhizaclimate changegreat web-spinning pine sawflyAgronomy13. Climate actionSeedlingShootengineeringta1181Fertilizer010606 plant biology & botanySoil Biology and Biochemistry
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Floral scent in a sexually deceptive Ophrys orchid: from headspace collections to solvent extractions

2018

Sexually deceptive orchid flowers use visual, tactile and olfactory cues of female insects in order to attract males of one or a few closely related species as pollinators. Ophrys L. is the most species-rich genus of sexually deceptive orchids in the Mediterranean Basin. Despite Ophrys pollinated by Andrena male bees use alkanes and mainly alkenes with specific double-bond positions as key signals that trigger pseudocopulatory behavior, some volatile organic compounds (VOCs) with low molecular weight were found as long-range attractants non-eliciting copulatory behavior. Since floral scents in Ophrys have been extensively studied by solvent extractions here we aimed to understand which flor…

0106 biological sciences0301 basic medicineAndrenapollinationPollinationAndrenaPlant ScienceFlowers01 natural sciencesGas Chromatography-Mass Spectrometry03 medical and health sciencesPollinatorvolatile organic compoundsBotanyOphrys panormitanaOrchidaceaeOphrysOrchidaceaebiologySettore CHIM/06 - Chimica Organicabiology.organism_classificationPseudocopulation030104 developmental biologyOdorantsSettore BIO/03 - Botanica Ambientale E ApplicataKovats retention indexGas chromatography010606 plant biology & botanyResearch Paper
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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Characterization of Sicilian rosemary (Rosmarinus officinalis L.) germplasm through a multidisciplinary approach.

2020

In Sicily, small differences exist between wild and cultivated rosemary biotypes; VOCs and genetic profiles may be a useful tool to distinguish them. A germplasm collection of Rosmarinus officinalis L. was harvested from 15 locations in Sicily. Eleven wild and four cultivated populations were collected and, due to the surveyed area covered, they can be considered as a representative panel of Sicilian genetic background of the species. Ex situ plant collection was transferred to the field cultivation in homogeneous conditions for characterizing through a multidisciplinary approach. The study included morphological traits observations (growth habitus, flower color, number and size of leaves, …

0106 biological sciences0301 basic medicineGermplasmPopulationBiodiversityPlant Science01 natural sciencesGenetic diversityRosmarinusWild populationsRosemary; SSR; biodiversity03 medical and health sciencesBotanyGeneticseducationGenome sizeGenetic diversityeducation.field_of_studyAnalysis of VariancebiologyVolatile organic compoundbiology.organism_classificationFlow CytometryRosmarinusPlant Leaves030104 developmental biologyOfficinalisMedicinal and aromatic plantMicrosatelliteSimple sequence repeat010606 plant biology & botanyMicrosatellite RepeatsPlanta
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Novel mutations in the voltage-gated sodium channel of pyrethroid-resistant Varroa destructor populations from the Southeastern USA

2016

The parasitic mite Varroa destructor has a significant worldwide impact on bee colony health. In the absence of control measures, parasitized colonies invariably collapse within 3 years. The synthetic pyrethroids tau-fluvalinate and flumethrin have proven very effective at managing this mite within apiaries, but intensive control programs based mainly on one active ingredient have led to many reports of pyrethroid resistance. In Europe, a modification of leucine to valine at position 925 (L925V) of the V. destructor voltage-gated sodium channel was correlated with resistance, the mutation being found at high frequency exclusively in hives with a recent history of pyrethroid treatment. Here,…

0106 biological sciences0301 basic medicineInsecticidesVeterinary medicineGene Identification and Analysislcsh:MedicineMicrobiologiaVoltage-Gated Sodium ChannelsFlumethrinmedicine.disease_causeBiochemistry01 natural sciencesAbellesInsecticide Resistancechemistry.chemical_compoundMethioninePyrethrinsÀcarsDestructorAmino Acidslcsh:ScienceMitesMutationMultidisciplinaryPyrethroidbiologyOrganic CompoundsGeneral MedicineBeesSoutheastern United StatesInsectsChemistryPhysical SciencesInsect ProteinsGeneral Agricultural and Biological SciencesResearch ArticleArthropodaApiaryParàsitsVarroidaeGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesLeucineparasitic diseasesGeneticsMitemedicineAnimalsPoint MutationSulfur Containing Amino AcidsIsoleucineMutation DetectionAllelesbusiness.industryPoint mutationOrganic Chemistrylcsh:ROrganismsChemical CompoundsBiology and Life SciencesProteinsbiology.organism_classificationInvertebratesHymenopteraBiotechnology010602 entomology030104 developmental biologyAliphatic Amino AcidschemistryGenetic LociVarroa destructorMutationlcsh:Qbusiness
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Volatile organic compounds in wild fungi from Mediterranean forest ecosystems

2017

AbstractHead Space-Solid Phase Micro Extraction (HS-SPME) extractions and Gas Chromatography-Mass Spectrometry (GC-MS) analysis allowed the identification of 72 different compounds isolated from 7 different wild inedible fungi collected in Mediterranean forest ecosystems. The VOCs reported in this study, including a total of 5 esters, 17 alcohols, 14 aldehydes, 9 ketones, 18 terpenes and 9 other compounds, have been never characterized before for Tricholoma ustaloides, Hygrophorus cossus, Russula foetens and Mycena pura.

0106 biological sciences0301 basic medicineMediterranean climatevolatile organic compoundTricholoma ustaloidesSettore AGR/13 - Chimica AgrariaBiodiversityBiology01 natural sciencesMediterranean areaTerpene03 medical and health sciencesForest ecologyBotanyHS-SPMEbiodiversitySettore BIO/02 - Botanica SistematicaExtraction (chemistry)Chemistry (all)General Chemistry030108 mycology & parasitologybiology.organism_classificationEnvironmental chemistryMycena puraBasidiomycetefungiHygrophorus cossus010606 plant biology & botany
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An integrated proteomic and metabolomic study to evaluate the effect of nucleus-cytoplasm interaction in a diploid citrus cybrid between sweet orange…

2018

Key message: Our results provide a comprehensive overview how the alloplasmic condition might lead to a significant improvement in citrus plant breeding, developing varieties more adaptable to a wide range of conditions. Abstract: Citrus cybrids resulting from somatic hybridization hold great potential in plant improvement. They represent effective products resulting from the transfer of organelle-encoded traits into cultivated varieties. In these cases, the plant coordinated array of physiological, biochemical, and molecular functions remains the result of integration among different signals, which derive from the compartmentalized genomes of nucleus, plastids and mitochondria. To dissect …

0106 biological sciences0301 basic medicineProteomicsCitrusCytoplasmCitruProtoplast fusionCybridPlant ScienceProteomicsDisaccharides01 natural sciencesGenomeMass SpectrometryDisaccharideCitrus spp.Electrophoresis Gel Two-DimensionalCell NucleuChromatography High Pressure LiquidCitrus sinensiPlant ProteinsGeneticsChromatography Reverse-Phasefood and beveragesPlant ProteinGeneral MedicineVolatile organic compoundGlucuronateProteomePloidyPlant LeaveCitrus sinensisBreeding programMetabolomicGlucuronatesStomatal conductanceBiology03 medical and health sciencesMetabolomicsGeneticGeneticsMetabolomicsPlant breedingPlastidCitrus sppCell NucleusVolatile Organic CompoundsfungiProteomicDiploidyPlant LeavesPlant Breeding030104 developmental biologyAgronomy and Crop Science010606 plant biology & botanyPlant molecular biology
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